He wrote Tolérance des religions, published by Henri de Græff at Rotterdam in 1684; it was a plea to French Catholics for religious tolerance. His Histoire des Ouvrages des Savans was a periodical appearing from 1687 to 1709; it was a sequel to the Nouvelles de la République des Lettres of Pierre Bayle, who had sheltered him and his brother Jacques. The change of title was in fact cosmetic, to avoid trouble with the publisher of the Nouvelles. Basnage himself did almost all the editorial, and the reviews of John Locke's works, in particular, did much to spread his ideas. He worked over the Dictionnaire universel of Antoine Furetière, producing an expanded edition; it went through numerous editions, before being taken up by Jean Brutel de la Rivière. Basnage's version was considered "Protestant"; the Jesuits of the Mémoires de Trévoux found heresy in articles where they considered he had introduced a Protestant view. Basnage defended himself in the Journal des sçavans, but the Jesuits went ahead with an expurgated edition, a model for the Dictionnaire de Trévoux. Basnage's lexicographical approach was in fact more descriptive than normative. Under the pseudonym Le Fèvre, Basnage also wrote the Lettre sur les differends de M. Jurieu & de M. Bayle. His publications were:
Histoire des Ouvrages des Savans. Volumes 1-24., Geneva, Slatkine Reprints, 1969
Dictionnaire universel: contenant generalement tous les mots françois tant vieux que modernes, & les termes des sciences et des arts... : et enfin les noms des auteurs qui ont traitté des matieres qui regardent les mots, expliquez avec quelques histoires, curiositez naturelles, & sentences morales, qui seront rapportées pour donner des exemples de phrases & de constructions : le tout extrait des plus excellens auteurs anciens & modernes. New edition by Jean-Baptiste Brutel de La Rivière. Reprinted by Hildesheim, New York, Georg Olms, 1972.
Traitez de mechanique, de l'equilibre des solides et des liqueurs : où l'on ajoute une nouvelle maniere de demontrer les principaux théorêmes de cette science, with Bernard Lamy, Amsterdam, Mortier, 1734
Lettre sur les differends de M. Jurieu & de M. Bayle, 1690
Réponse de l'auteur de l'Histoire des ouvrages des sçavans à l'Avis de M. Jurieu, Rotterdam, Reinier Leers, 1690
Lettres historiques: contenant ce qui se passe de plus important en Europe; et les réflexions nécessaires sur ce sujet. Tome I . Mois de Janvier 1692 , with Jean Dumontet al., The Hague, Adrian Moetjens, 1692-1736