Capak is currently the Architect of Perception Systems at the Oculus division of Facebook. Until 2020 he was a senior research scientist and lead of the SPHERExscience center at the Infrared Processing and Analysis Center, Caltech and a member of the NASAEuclid Science Center at IPAC. He previously was a member of the Spitzer Science Center where he led the Spitzer Enhanced Imaging Products pipeline team and the Spitzer Frontiers Field Initiative. He was also a principal investigator on the Spitzer Large Area Survey with Hyper-Suprime-Cam project. Before joining IPAC, he was a postdoctoral fellow on the Cosmic Evolution Survey and a graduate student at the University of Hawaii at Manoa. Capak joined Caltech, in 2004, to work on the COSMOS project where he led the multi-wavelength data processing and analysis effort. As part of this work he developed a way of estimating redshifts from photometry that accounted for the signal strength of weak lensing, enabling the first 3-dimensional map of dark matter. He subsequently led the development of new technique based on manifold learning that significantly reduced the number of observations required to calibrate photometric redshifts for dark energy measurements. This made it practical to carry out the calibration observations in a reasonable amount of time on the Keck and VLT telescopes with the C3R2 survey. Capak has also worked on improving galaxy modeling techniques using more advanced statistical methods and machine learning including leading the development of the fitting pipeline for the SPHEREx mission. In 2010, Capak took over leadership of the COSMOS collaboration which he led until 2018. The COSMOS data set helped to develop the concept behind several experiments to measure the properties of dark matter and dark energy including the Dark Universe Explorer, which was incorporated into the Euclid mission. Capak consulted on the design of NASA's Wide Field Infrared Survey Telescope. He was also a co-investigator on the team that developed NASA's SPHEREx mission. Capak's work has been featured in the media including his work on Abell 520, the Baby Boom Galaxy. He also discovered the most distant known cluster of galaxies and carried out the first large study of the interstellar medium in the distant universe. In 2017-2019, he was identified as one of the top 1% of cited researchers in space sciences.. Since 2017, Capak has been an associate of the Cosmic Dawn Center in Copenhagen, Denmark, a center focused on high-z research.