Desjardins began his coaching career at the University of Calgary in 1985 as assistant coach and became head coach in 1989. He then coached the Seibu Bears in Japan. He then returned to Canada and became head coach of the Saskatoon Blades, replacing Donn Clark midway through the 1997–98 season. He was then offered a job as an assistant coach for the Canada men's national team. Once hired by the Medicine Hat Tigers, Desjardins was instrumental in the Tigers' first playoff appearance in five years in the 2002–03 season, leading them to a Memorial Cup appearance and their 4th WHL championship in 2003–04, and a 96-point Eastern Conference regular season champion 2004–05 season. Desjardins took on the duties of general manager for the 2005–06 season. Desjardins was awarded the Dunc McCallum Memorial Trophy for the Coach of the Year in the Western Hockey League and the Canadian Hockey League. In 2009, he was the assistant coach of Team Canada's World Junior Gold medal team, under head coach Pat Quinn and alongside fellow assistant coaches Guy Boucher and Dave Cameron. Desjardins was the head coach of Team Canada's 2010 World Junior Ice Hockey Championships team. From 2010 to 2012, Desjardins served as the associate head coach of the Dallas Stars of the National Hockey League before being selected as the head coach of their AHL team in Cedar Park, Texas in June 2012. On June 17, 2014, he led his Texas Stars team to their first Calder Cup Championship. On June 23, 2014, Desjardins was hired as the head coach for the Vancouver Canucks, replacing John Tortorella, who was dismissed as head coach after one season. After an initial successful regular season, his team struggled, and on April 10, 2017, he was fired after missing the playoffs for the second consecutive season, along with assistants Perry Pearn and Doug Lidster. Desjardins posted a record of 109–110–27 in three seasons with the club. On July 25, 2017, he was named head coach of Canada's men's team at the 2018 Winter Olympics in Pyeongchang, South Korea, with his university head coach Dave King as an assistant. In December 2017, he led Team Canada to gold at the Spengler Cup in Davos. On November 4, 2018, Desjardins was named interim head coach by the Los Angeles Kings after they fired John Stevens. Desjardins' presence did not lead to the team improving as the Kings went 27–34–8 and finished in last place in the Western Conference. One day after the season ended, the Kings announced that they would not bring Desjardins back for the 2019–20 season. On May 31, 2019, it was announced that Desjardins had been re-hired as head coach and general manager of the Medicine Hat Tigers.
Personal life
Desjardins holds bachelor of education and a master of social work degrees. He and his wife, Rhonda, have two sons and a daughter. Desjardins is also the owner of a golf course, two RV parks, and a mini golf course. His daughter studies journalism, and has her broadcasting degree.