The voters in the independence referendum organized by Tskhinvali answered the question: "Should the republic of South Ossetia retain its current status as an independent State, and be recognized by the international community?" Parallel to the referendum and elections, the Georgia-backed Ossetian opposition movement organized its own elections in Eredvi, inhabited by ethnic Georgians, in which five Ossetian presidential candidates opposed to Eduard Kokoity took part. On the alternative referendum the voters answered the following question: "Should South Ossetia engage in discussions with Tbilisi concerning a federal State uniting it with Georgia?" According to the Electoral Commission of Alternative Elections, 42,000 voters turned out for the elections held in the territories under Georgian control, but Tskhinvali claimed that the voters numbered only 14,000. Dmitry Sanakoyev was elected by 88% of voters as the alternative President of South Ossetia.
The Georgian government has declared both the election and the referendum illegal, but it was believed to support the Salvation Union of Ossetians, the organization in charge of holding the alternative elections. Kokoity thus accused Tbilisi of staging the alternative elections that aimed at "dividing the Ossetian people". On 12 September 2006, the Chairman of the Russian State Duma, Boris Gryzlov, welcomed the appointed South Ossetian referendum and announced that Russian parliamentarians would observe the voting process. On 13 September 2006, the Georgian State Minister for Conflict Resolution Issues, Merab Antadze, issued a statement, condemning Gryzlov's statement as "destructive." The European Union Special Representative to the South Caucasus, Peter Semneby, downplayed the forthcoming South Ossetian referendum and said in Moscow, on 13 September 2006, that the referendum would not contribute to the conflict resolution process in South Ossetia. On 13 September 2006, the Council of EuropeSecretary GeneralTerry Davis commented on the problem, stating that: The head of the Institute of CIS Countries and the member of the Russian State Duma, Konstantin Zatulin, is quoted during his visit to Artsakh in October 2006, where he spoke only about Artsakh and Transnistria, as saying: On 2 October 2006, the Organization for Security and Co-operation in Europe Chairman-in-Office, Belgian Foreign Minister Karel De Gucht, said during his visit to Tbilisi: On 11 November 2006, Secretary General of NATOJaap de Hoop Scheffer said in a statement: On 11 November 2006, Luis Tascón, a member of the National Assembly of Venezuela, said during a press-conference in Tskhinvali: "Those people who wish to be free, will be free." He also hinted that Venezuela might eventually recognize the South Ossetian independence, claiming that president Chávez would make a correct decision. He also noted that his presence in Tskhinvali did not guarantee the recognition the South Ossetian independence by Venezuelan Government. On 11 November 2006, Sergei Fyodorov, an observer and Latvian Parliament member of Russian nationality, and a member of Socialist Party, stated during a press-conference in Tskhinvali that all peoples had the right for self-determination, and it could not be ignored. He also made a commitment to inform the other members of the Latvian Saeima of his observations. On 13 November 2006, the European Unionforeign ministers said that the vote did not contribute to conflict resolution. The OSCE and the Council of Europe reiterated that they would not recognize the referendum and condemned it as unproductive. An EU statement was later joined by Ukraine.