The BCRR was incorporated on December 17, 1853 with capital of $2,500,000, a large sum in those days. Its first line, the Myrtle Avenue Line, was the first horsecar line in Brooklyn, and opened on July 3, 1854. The line operated from Fulton Ferry via Fulton Street and Myrtle Avenue to the former stagecoach stables at Marcy Avenue. The New York State Legislature permitted it to reduce its capital to $1,000,000 in 1855.
In 1893, the Long Island Traction Company, a holding company, acquired the Brooklyn Heights Railroad, operator of a short cable car line on Montague Street in Brooklyn Heights and used this latter company as its operating arm. The BHRR obtained a 999-year operating lease on the Brooklyn City the same year. By this time the Brooklyn City operated 27 streetcar lines.
The LIT was foreclosed and reorganized in 1895 as the Brooklyn Rapid Transit Company, which soon acquired, through lease or stock ownership, most of the trolley and rapid transit lines in Brooklyn. The BRT became the public face of transportation in Brooklyn. Nevertheless, the BRT operated all of its lines through its operating companies, some of which were created just for that purpose, and others that were leased or subsidiaries, such as the Brooklyn City. Patrons may have noticed this in subtle ways, such as that streetcar transfers had the letters "B.C.R.R." imprinted on their face.
Company revival
In 1919, the BRT went into receivership as the result of a number of factors, such as the serious inflation of World War I, and not helped by the Malbone Street Wreck on the Brighton Line, which killed at least 93 people on November 1, 1918. Though the BRT was bankrupt, the Brooklyn City was declared solvent, and its charter and separate corporate existence were resumed. The lease by the Brooklyn Heights was ended and the lines the BCRR controlled in 1893 and more became its lines again on October 19, 1919. The BCRR had its own crews, cars and carbarns, and even purchased new equipment in its own name, though the overall planning and management was still effectively with the BRT. A negative consequence for passengers was that BCRR lines no longer issued transfers to the lines still with the BRT, and vice versa. When the BRT was reorganized as the Brooklyn–Manhattan Transit Corporation in 1923, the former BRT companies gradually were brought out of receivership. Nevertheless, the Brooklyn City did not become part of the BMT, but remained a separate company until June 1, 1929, when the BMT formed the Brooklyn and Queens Transit Corporation to consolidate all of its surface operations in one operating company, which finally ended the corporate existence of the Brooklyn City.