Chromosome 2


Chromosome 2 is one of the twenty-three pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 2 is the second-largest human chromosome, spanning more than 242 million base pairs and representing almost eight percent of the total DNA in human cells.
Chromosome 2 contains the HOXD homeobox gene cluster.

Evolution

Humans have only twenty-three pairs of chromosomes, while all other extant members of Hominidae have twenty-four pairs. Human chromosome 2 is a result of an end-to-end fusion of two ancestral chromosomes.
The evidence for this includes:

Number of genes

The following are some of the gene count estimates of human chromosome 2. Because researchers use different approaches to genome annotation their predictions of the number of genes on each chromosome vary. Among various projects, the collaborative consensus coding sequence project takes an extremely conservative strategy. So CCDS's gene number prediction represents a lower bound on the total number of human protein-coding genes.
Estimated byProtein-coding genesNon-coding RNA genesPseudogenesSourceRelease date
CCDS1,1942016-09-08
HGNC1,1964509312017-05-12
Ensembl1,2921,5981,0292017-03-29
UniProt1,2742018-02-28
NCBI1,2811,4461,2072017-05-19

List of genes

The following is a partial list of genes on human chromosome 2. For complete list, see the link in the infobox on the right.

p-arm

Partial list of the genes located on p-arm of human chromosome 2:

q-arm

Partial list of the genes located on q-arm of human chromosome 2:

Related disorders and traits

The following diseases and traits are related to genes located on chromosome 2:
Chr.ArmBandISCN
start
ISCN
stop
Basepair
start
Basepair
stop
StainDensity
2p25.30388gneg
2p25.2388566gpos50
2p25.1566954gneg
2p24.39541193gpos75
2p24.211931312gneg
2p24.113121565gpos75
2p23.315651789gneg
2p23.217891908gpos25
2p23.119082027gneg
2p22.320272296gpos75
2p22.222962415gneg
2p22.124152609gpos50
2p2126092966gneg
2p16.329663220gpos100
2p16.232203294gneg
2p16.132943548gpos100
2p1535483757gneg
2p1437573935gpos50
2p13.339354114gneg
2p13.241144248gpos50
2p13.142484353gneg
2p1243534860gpos100
2p11.248605307gneg
2p11.153075545acen
2q11.155455724acen
2q11.257246022gneg
2q12.160226261gpos50
2q12.262616395gneg
2q12.363956559gpos25
2q1365596812gneg
2q14.168127036gpos50
2q14.270367334gneg
2q14.373347602gpos50
2q21.176027826gneg
2q21.278268050gpos25
2q21.380508169gneg
2q22.181698437gpos100
2q22.284378497gneg
2q22.384978646gpos100
2q23.186468735gneg
2q23.287358795gpos25
2q23.387959078gneg
2q24.190789361gpos75
2q24.293619585gneg
2q24.395859928gpos75
2q31.1992810435gneg
2q31.21043510599gpos50
2q31.31059910733gneg
2q32.11073311091gpos75
2q32.21109111225gneg
2q32.31122511538gpos75
2q33.11153811925gneg
2q33.21192512060gpos50
2q33.31206012283gneg
2q341228312641gpos100
2q351264113014gneg
2q36.11301413237gpos75
2q36.21323713297gneg
2q36.31329713595gpos100
2q37.11359513893gneg
2q37.21389313998gpos50
2q37.31399814400gneg