The Sundarbans East Wildlife Sanctuary is in a low-lying area of flat islands interspersed by a network of waterways. It is situated between the Katka and Supati Kals creeks in the Ganges Delta and is bounded to the south by the Bay of Bengal. The Baleshwari River supplies some freshwater but otherwise the waters are saline, being constantly replenished by the rise and fall of the tide. Sands collect near the mouth of the creeks and is blown into dunes and in their lee, silt accumulates. The altitude of the sanctuary varies between above sea level. The soil is more fertile than that of Sundarbans West Wildlife Sanctuary and Sundarbans South Wildlife Sanctuary because a larger quantity of sediment is deposited here by the River Ganges. As the land is raised by accumulating silt, it gets inundated by the tide less often. The soil pH is mostly between 7.0 and 8.0. Up to of rainfall falls at the coast with most precipitation being during the monsoon, which lasts from June to October. The driest months are December, January and February. In the winter the temperature may fall as low as but rises to a maximum of about in April and May. The mean annual temperature is about. The average relative humidity is high, ranging between 77 and 80%, and peaking during the monsoon at 95%. There are four main types of habitat in the sanctuary; mangrove woodlands, grasslands, sandy beaches and areas of transition.
Flora
Mangroves in this delta region are not dominated by members of the Rhizophoraceae family, probably because of the low salinity caused by the inflow of river water. The commonest species are "sundri", interspersed with "gewa" and "passur", with "kankra" occurring in areas subject to more frequent flooding. There is an understory of "shingra" where, soils are drier, "amur" in wetter areas and goran where the salinity is higher. Nypa palm is widespread along drainage channels. The most abundant plants on the forest floor were the mangrove date palm, holly-leaved acanthus, Sarcolobus globosus and Derris trifoliata.
The reserve is managed from administrative offices at Katka and Tiger Point. Certain activities are prohibited in the reserve; settlement, the cultivation of land, keeping livestock, damaging the vegetation, hunting and lighting fires. Management is directed at conservation of the tigers and other wildlife as a part of forest management. In the long-term, as sediment is deposited, the main channels in the Ganges Delta are migrating eastwards. As other channels silt up, the reserve is becoming more saline and a gradual replacement of Heritiera fomes by Excoecaria agallocha may occur. Oil spills, such as happened in December 2014, are a threat to the aquatic life and the forest itself. Tropical cyclones and tsunamis can cause great damage to this low-lying area, and wood-cutting and unauthorised hunting and fishing take place. The landfall of Cyclone Sidr in 2007 damaged around 40% of the area.